Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936024.1_cds_XP_016481678.1_72981
CDS Infomation

[gene=LOC107802658] [db_xref=GeneID:107802658] [protein=membrane protein of ER body-like protein isoform X2] [protein_id=XP_016481678.1] [location=join(93991..94819,97239..97823,98723..98863,99656..99901,100222..100569,101193..101372,102131..102319,106115..106330,106738..106799,107112..107582)] [gbkey=CDS]
Sequence

ATGGAGAAAGAAGATTTGAAATGGGAGCAAAATGAGGTGGAACTAGCTGAAGAAGAAGAA
GAATTAGGGGGTCTTCAAGTAAGAAGCTCTAAAGCTACTAAAGAAGTAACCAATGGGAAA
ATTGAGACAAATGGGCATGCAAATTCTTCACCTAAGATCACTAATGGAACAGAAAAATCT
GATCTTGGTGATGTACAAGAAAGTTCAGAGAAGATACTTTCAGATTCCAATTATGGGGTT
GAAGTTGAAGAGGAAACAGAACCAAAAGAGGTGTCAGTTGAGCAGGTTTTAGCCTCAAAT
AATGGGGTTGAAGAGGGAACAACTGAAGCTAAAGAAGAGTTAGAAAAGCAGTTTGTGACT
TTAGCTAATGGGACTGAAATATCTGATCTTGATAATGAACAAGAAAAGTCAGGAGATCAG
CTTGCAGATTCCAATAATGAGGTTGAAGCTGAAGAAGTAAAAGAACAAAAAGAAGTGTCA
GTTCAGCAGGTTGTTGCTTCAAATAATGGGGTTGAAGAGGGAACTGAAGCTAAAGAAGAG
TCAAAACAACAGTTTATGATTTCAACTAATGGGACTGAAAAAATTGATCTTGATTATGAA
CAAGAAAGATCAGAAGTGCAGTTTTCAGATTCCAATAATGGAGTTGAAGTTGAAGAAGGA
AAAGAACAAAAAGAAGAGTCAACTCAGCAGGTTGTAGCTTCAAATAATGGGGTTGAAGAG
GAAAGTGAAGCTAAAGAAGAGTCAAAACAGCATCTTGTGACATCAACTAATGGGACTGAA
GAAGGGCCCTTCAAATCAGGCCATTCTGTTTATTATGACAAAGATGAAGATAGTAACTTC
ACTTCTACACCTTCCATAAAGGAGAAGATTGATAAAAATCCAGTAGATGAAGAAGTTCAG
GAGAGTGCTGTTCTAGACATTCAACTTAATGGATATTTGAAGAGTGACAACTTGTCAAAT
TCAGGTGCTCAGCCGTCCAAATATCTTTCAGAAGATCACCGTATAGTTCATAAGTCCACA
TCCATTGAAGAAATAGAAAGTGCAGACACTGACCTGATAAATGACAGTGACACTGATGTA
AAAGATTATGATGTTGAGAATGTACTTCAGAAGCAGAATACACATGATCTTTATTGCCCT
AATTGCAAGTCGTGCATTACTAGGAGGGTTATTCTTCGTAAAAGAAAACGAAAGATTCGA
ATTTCTGGTGATGATGTGAAACGTAATAAACTCGAAGGTGTAGTTGACTCCAAAGTGGAT
GCTAGTCATGCACAGGCAACTAGTGATCAAGTACGCGATCGAGCCAACACTTCTTTTGAT
GGTACTCCACAATTGGCAGCGGATGACTACCAGCCGGATAGAGAGCCAGAGATATTCAGA
TGCTTATCATGCTTCAGCTTTTTCATTCCAACAGGGAATGGATTCAAGCTGTTCCGATGT
TTTGGAGAGAAAGGTGATAAACAAAATGTCAAAGGTGAACAGACACCTACGACGAACAAA
AATTGGTTCTCCTCTATCTTTGCATCAGATAAGGGAAAAGCATCAGTTGAGCAAGGAATT
GGTATTGGGGCAAATGCAGTGAAAAATGATGCTGGAGTACTTACGCCATCAGATAATTTC
AAAGATCAGAGTGCCAAGCCCTTAGTGATTAGGGAATCAGCCCCGCTTGCATATTCCAGC
AGTGGAACTCAGGAAGCTGGAGGGAAAATTTTAGGATCAGAGAACCAAGATGCAAAAATG
AAGGGGAAAATGGCGATTGATACAGTGGGTAAATCAGAGAATGCAACAAAGACTCAAGCA
GGAGGTTCTGTCTTCGACATCTTTGAAGAAGGGATCCGTAATCTGCCAGATGTTGCAGCC
TCTTCTGAGAAAGTTCGAGGAAATGATAGGAATGATGAGCTGTTAAGAACTGCTGGCAGA
ATTCAAGTTAGTAATGGAAATCTTGTGCAGGAGAGTCTGCCAGCATCTCAACAAACTGGA
TCAAAGGTTCTGATAACTTCAACAAAGGAGGAGTCTCTAACTATTGAGAAATCAGAGACT
GAGTTAAAATCTGATGTAATGATAACTTCAACAAAGGAGGAGTCTCTAACTATTGAGAAA
TCAGAGACTGAGTTAAAATCTGATAAGATGTTACTAAATAAAGGTCCAGATAATGAGTCC
CTTCTGTCTTCGGCAACCACAGCTTTTGCACTCAATGGCTTAGATGGAAATGGGAAACCC
AAGTTTTTGACAGAAATCCCTCAAGAACACGAGCAAAATATCAAAGCCATGCTTCCCTCT
GAGTCTCCGGTGGAAAACAATGGCAATAATTTTCAACTTAGTAATAAAGATGGTTCGGAT
CCTTATGAAATTTCTCAACATAACATCACAAAGACCAAATTTGAGATCCACTCGAAGCAG
CCTTTAAAAGTTGATAAGGATGCGTTATTTTCATCGGTAAAGGATGCTTTATCAATTCAC
GATGCACCAGTTAATATCACCAACATTTCTGTGGAAGCAGCTGCAAATGGCATTGCAGGC
AAGGACACTGTTATAACTGTGGAAGCAGGGCATGAAACTGCAGAAACTTCACCAAATCTA
GATACTCAAATCCACATTGTTCAACGACAAGGAACTGATACTGCAGAAGTTTACAGAATT
GAGATCATTAAAAGCATTATATTTGGGGGTTTAGCTGAGTCAATTGCAAGCTTAAGTGTT
GTATCATCTGCAGCTGGTGGCGACACAACTACATTGAACATTTTAGTTCTGGGAATGGCT
AATCTGATTGGTGGGCTTTTCATCATTTTCCACAATATTTGGGAGTTGAAAAGAGATCGT
TATGAGCAAGCCAGCAACCAGATAATGGAGAGACATGTAGATAGGTATCGACAACTACTA
GGCCGGAGAGAAAACTTCACAATGCATGCCGTAGTTGCTGTACTATCATATATCATATTT
GGACTAGTCCCTCCAATAGTCTTCGGCTTCTCATTCCGCAAGAGTGATGACAGGGAATTC
AAACTCGTGGCAGTTGCTGCAGCTTCGCTTGTATGCATCTTAATGCTGGCAACTGGAAAG
GCCTATGTTCAAAGAGCACCCAAATCTTACTTCAAAACTATAGCTACTTACATTATTTTG
GGGTTCACTGTTTCGGGTGTGTCTTATGCAGCAGGTATATTATTCAAAAGACTGCTGGAA
AAACTTGGTTTTTTCGAGCCAAGTTCAACAGTAAACCTGCTCCTACCGGAGATACCAGGG
ACCCGAGGAGTATGGGCATCCTTATGA

Peptide Sequence

PEP ID

XP_016481678.1
PEP Infomation

PREDICTED: membrane protein of ER body-like protein isoform X2 [Nicotiana tabacum]
Sequence

MEKEDLKWEQNEVELAEEEEELGGLQVRSSKATKEVTNGKIETNGHANSSPKITNGTEKS
DLGDVQESSEKILSDSNYGVEVEEETEPKEVSVEQVLASNNGVEEGTTEAKEELEKQFVT
LANGTEISDLDNEQEKSGDQLADSNNEVEAEEVKEQKEVSVQQVVASNNGVEEGTEAKEE
SKQQFMISTNGTEKIDLDYEQERSEVQFSDSNNGVEVEEGKEQKEESTQQVVASNNGVEE
ESEAKEESKQHLVTSTNGTEEGPFKSGHSVYYDKDEDSNFTSTPSIKEKIDKNPVDEEVQ
ESAVLDIQLNGYLKSDNLSNSGAQPSKYLSEDHRIVHKSTSIEEIESADTDLINDSDTDV
KDYDVENVLQKQNTHDLYCPNCKSCITRRVILRKRKRKIRISGDDVKRNKLEGVVDSKVD
ASHAQATSDQVRDRANTSFDGTPQLAADDYQPDREPEIFRCLSCFSFFIPTGNGFKLFRC
FGEKGDKQNVKGEQTPTTNKNWFSSIFASDKGKASVEQGIGIGANAVKNDAGVLTPSDNF
KDQSAKPLVIRESAPLAYSSSGTQEAGGKILGSENQDAKMKGKMAIDTVGKSENATKTQA
GGSVFDIFEEGIRNLPDVAASSEKVRGNDRNDELLRTAGRIQVSNGNLVQESLPASQQTG
SKVLITSTKEESLTIEKSETELKSDVMITSTKEESLTIEKSETELKSDKMLLNKGPDNES
LLSSATTAFALNGLDGNGKPKFLTEIPQEHEQNIKAMLPSESPVENNGNNFQLSNKDGSD
PYEISQHNITKTKFEIHSKQPLKVDKDALFSSVKDALSIHDAPVNITNISVEAAANGIAG
KDTVITVEAGHETAETSPNLDTQIHIVQRQGTDTAEVYRIEIIKSIIFGGLAESIASLSV
VSSAAGGDTTTLNILVLGMANLIGGLFIIFHNIWELKRDRYEQASNQIMERHVDRYRQLL
GRRENFTMHAVVAVLSYIIFGLVPPIVFGFSFRKSDDREFKLVAVAAASLVCILMLATGK
AYVQRAPKSYFKTIATYIILGFTVSGVSYAAGILFKRLLEKLGFFEPSSTVNLLLPEIPG
TRGVWASL

Transcript Sequence

Gene sequence data has not been registered.